Important words and concepts from Chapter 23, Campbell & Reece, 2002 (3/25/2005):

by Stephen T. Abedon (abedon.1@osu.edu) for Biology 113 at the Ohio State University

 

 

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Vocabulary words are found below

 

 

(1) Chapter title: The Evolution of Populations

(a)                    "An organism exposes its phenotype—its physical traits, metabolism, physiology, and behavior—not its genotype, to the environment. Acting on phenotypes, selection indirectly adapts a population to its environment by increasing or maintaining favorable genotypes in the gene pool." (p. 430)

(b)                    "One obstacle to understanding evolution is the common misconception that individual organisms evolve, in the Darwinian sense, during their lifetimes. In fact, natural selection does act on individuals; their characteristics affect their chances of survival and reproductive success. But the evolutionary impact of this natural selection is only apparent in tracking how a population of organisms changes over time… Thus, it is the population, not its individuals, that evolves, as some heritable variation becomes more common at the expense of others." (p. 416)

(c)                    ["To the people gathered there, most of whom had no more than a first- or second-grade education, some genetic principles seemed to make intuitive sense, whereas others did not. No one had trouble, for instance, understanding that traits can be inherited. But the fact that the probability of inheriting a trait is unrelated to the previous births was more difficult to grasp. If one parent has the Alzheimer's mutation, there is a 50 percent risk that each child will have it too. But, just as parents who have had three girls in a row may expect their chance of having a boy to increase, the villagers endorsed a logical fallacy. One man announced to the assembled group: ‘We the families in which there are only a few affecteds must be grateful to those families with many affecteds.’ Local ideas of guilt and collective burden were deeply ingrained, and clashed with the principles of population genetics." p. 15 of Kenneth S. Kosik, 1999, The fortune teller, The Sciences 39:13-17]

(d)                    [the evolution of populations (Google Search)] [population evolution and speciation (BSC Courseware)] [index]

 

MICROEVOLUTION TOOLS AND OVERVIEW

 

(2) Population genetics

(a)                    Population genetics is essentially the study of allele and genotype frequencies within populations of organisms

(b)                    [population genetics (Google Search)] [DNA technology in forensic science (welcome to applied population genetics) (Committee on DNA Technology in Forensic Science)] [index]

(3) Modern synthesis

(a)                    The ultimate triumph of Darwinism required its integration with Mendelian genetics

(b)                    That is, evolution is a genetic phenomenon so cannot be fully (or even well) understood without an understanding of Mendelian genetics

(c)                    This synthesis between Darwinism and Mendelian genetics did not occur until the 1930s (recall that Darwinism and Mendelian genetics both came into being during the mid to late 1800s)

(d)                    The combination of Darwinism and Mendelian genetics is called the modern synthesis (of Darwinism and Mendelian genetics as well as paleontology, taxonomy, biogeography, and population genetics)

(e)                    "The modern synthesis emphasizes the importance of populations as the units of evolution, the central role of natural selection as the most important mechanism of evolution, and the idea of gradualism to explain how large changes can evolve as an accumulation of small changes occurring over long periods of time."

(f)                      ["…the Modern Synthesis is a theory about how evolution works at the level of genes, phenotypes, and populations whereas Darwinism was concerned mainly with organisms, speciation and individuals. This is a major paradigm shift and those who fail to appreciate it find themselves out of step with the thinking of evolutionary biologists. Many instances of such confusion can be seen here in the newsgroups, in the popular press, and in the writings of anti-evolutionists." (Talk.Origins)]

(g)                    [modern synthesis, the modern synthesis of genetics and evolution  (Google Search)] [index]

(4) Population

(a)                    The term population is more complex than you may realize

(b)                    However we will delay our discussion of the complexity inherent in the term population until our considerations of speciation

(c)                    For now, consider a population to be a localized group of interbreeding individuals (with lots of emphasis on interbreeding)

(d)                    [interbreeding population (Google Search)] [index]

(5) Species

(a)                    The term species is also fraught with complexity which will be considered more fully when we discuss speciation

(b)                    For now, consider a species to be a group of populations whose members are capable of interbreeding

(c)                    Species and populations possess certain properties (or characteristics) such as their location that we will discuss in more detail when considering population ecology

(d)                    One property is that the population's underlying a species may undergo different degrees of gene exchange ranging from very little (an isolated population) to quite a bit

(e)                    [species (Google Search)] [index]

(6) Gene pool

(a)                    In a population genetics sense, a population or species consists of a gene pool

(b)                    A gene pool "consists of all alleles at all gene loci in all individuals in a population."

(c)                    Recall that diploid individuals possess two alleles at each locus

(d)                    [gene pool (Google Search)] [index]

(7) Fixed locus (fixed allele)

(a)                    A locus for which only a single allele exists for an entire gene pool is considered to be fixed, i.e., a fixed locus

(b)                    We would describe the frequency of a fixed allele within a gene pool as 1.0

(c)                    We would describe the frequency of all other alleles as 0.0 (i.e., they are not present)

(d)                    An allele with a frequency of 0.0 is said to be extinct

(e)                    ["fixed locus" and genetics, "fixed locus" and evolution, fixed allele, fixed alleles (Google Search)] [index]

(8) Gene frequency (allele frequency)

(a)                    All alleles at not-fixed loci possess a frequency that is somewhere between 0.0 and 1.0

(b)                    We describe this frequency as allele frequency or, less correctly but more commonly, as gene frequency

(c)                    Remember that gene (or allele) frequency refers to the frequency of alleles in an entire gene pool, not in single individuals

(d)                    Remember that each diploid individual has two alleles at each locus

(e)                    [gene frequency, gene frequencies, allele frequency, allele frequencies (Google Search)] [index]

(9) Genotype frequency

(a)                    Remember that any one individual may be homozygous for only one allele of the one or more present in the population (at a given locus) or a given individual may be heterozygous at that locus

(b)                    Thus, three alleles (or many more) can exist in a population (with associated allele frequencies) but only up to two alleles at a time can exist within a given individual

(c)                    The frequency of genotypes within a population is dependent on the frequency of alleles (and visa versa, actually)

(d)                    It is only within genotypes that evolution acts on alleles

(e)                    Consequently, to understand evolution and evolutionary change, it is usually important to keep track of allele frequencies and to keep track of genotype frequencies

(f)                      That is, make sure the following makes sense to you:

(i)                      natural selection acts on phenotypes

(ii)                    genotypes underlie phenotypes

(iii)                   alleles underlie genotypes

(g)                    [genotype frequency (Google Search)] [index]

(10) Genetic structure (supplemental concept)

(a)                    Genetic structure is a population genetics term used to refer to a population’s allele and genotype frequencies

(b)                    Evolution may be defined as change over time of a population's genetic structure

(c)                    "Evolution is a generation-to-generation change in a population's frequencies of alleles and genotypes—a change in a population's genetic structure."

(d)                    [genetic structure (Google Search)] [index]

(11) Calculating allele frequencies

(a)                    Remember that a diploid organism has two (not necessarily different) alleles at each locus

(b)                    The frequency of an allele within a population is equal to the number of alleles of a given type within the population divided by the total number of alleles found at a given locus

(c)                    Thus, if 200 A alleles and 400 a alleles are found within a given population, then the frequency of A alleles is 200 / (200 + 400) = 1/3 = 0.33.

(d)                    If this is a diploid population, how many individuals are in this population? (answer: 300… make sure that these ideas and calculations make sense to you)

(e)                    [calculating allele frequencies, determining allele frequencies (Google Search)] [index]

(12) Calculating allele frequencies from genotype frequencies

(a)                    Note that very often one knows (or can infer) genotype frequency

(b)                    If so, then genotype frequency information can be used to calculate allele frequency. How?

(c)                    If a population has 100 Aa individuals, 200 aa individuals, and 300 AA individuals then the number of A alleles is 100*1 + 300*2 = 700; the number of a alleles is 100*1 + 200*2 = 500; the frequency of A therefore is 700 / (500 + 700) = 7/12 = 0.58

(d)                    Remember, diploid individuals contribute two alleles from each locus to the gene pool (hence the *2 in the above calculations); How many diploid individuals are present in the above example?

(e)                    [Calculating allele frequencies from genotype frequencies (Google Search)] [index]

 

CALCULATING GENOTYPE FREQUENCIES FROM ALLELE FREQUENCIES

 

(13) Calculating genotype frequencies from allele frequencies

(a)                    Calculating genotype frequencies from allele frequencies is also possible, but requires quite a bit of fudging

(b)                    In fact, much of this chapter deals with this fudging

(c)                    However, the calculations are simple: One assumes simply that alleles are picked at random from the gene pool to assemble genotypes

(d)                    Assume that the frequency of allele A is 0.4 and that the frequency of allele a is 0.6; What is the frequency of genotypes AA, Aa, and aa?

(i)                      Frequency AA = 0.4 * 0.4 = 0.16

(ii)                    Frequency aa = 0.6 * 0.6 = 0.36

(iii)                   Frequency Aa = 0.4 * 0.6 + 0.6 * 0.4 = 0.48

(e)                    Remember that there are two paths by which the heterozygote may be constructed, A from mom and a from dad, or a from mom and A from dad (make sure that this idea makes sense to you)

(f)                      Now, substitute the letter p for the frequency of A (i.e., in this example p = 0.4) and the letter q for the frequency of a (i.e., in this example q = 0.6); what is the frequency of the genotypes AA, Aa, and aa?

(i)                      Frequency AA = p * p = p2

(ii)                    Frequency aa = q * q = q2

(iii)                   Frequency Aa = p * q + q * p = 2pq

(g)                    Note that for a locus for which only two alleles are present in a population:

(i)                      p2 + 2pq + q2  = 1 = (p + q)2

(h)                    In addition, of course, keep in mind that

(i)                      p = 1 – q

(ii)                    q = 1 – p

(iii)                   1 = p + q

(i)                      Again, make sure that these ideas and generalizations make sense to you, particularly to the point where you are able to apply these ideas

(j)                      [(Google Search)] [index]

(14) Hidden recessives

(a)                    Genotype frequencies do not necessarily coincide with phenotype frequencies (e.g., as a consequence of complete dominance) so calculating genotype frequencies from phenotype frequencies is not necessarily straightforward

(b)                    However, if the frequency of the recessive allele is q then

(i)                      the frequency of the recessive homozygote is q2

(ii)                    the frequency of the dominant homozygote is (1 - q)2

(iii)                   the frequency of the heterozygote is 2 * q * (1 - q)

(iv)                  (these ideas and concepts should eventually make intuitive sense to you and you should be working towards that point, so make sure that these ideas makes sense to you to this point, before you move on, such that you are at least able to recapitulate and then utilize the underlying logic, e.g., why is the frequency of the dominant homozygote equal to (1 - q)2?)

(c)                    Thus, if the recessive allele, a, has a frequency of 0.01, then

(i)                      Frequency AA = 0.99 * 0.99 = 0.98

(ii)                    Frequency Aa = 2 * 0.99 * 0.01 = 0.02

(iii)                   Frequency aa = 0.01 * 0.01 = 0.0001

(d)                    (do you know where the above numbers come from? if you don’t, then you don’t understand the concept so go back and try again)

(e)                    In other words, in this example there are 200 times more heterozygotes carrying the recessive allele than there are recessive homozygotes carrying the recessive allele—rare recessive alleles are hidden in populations within heterozygotes (where does “200 times” come from? you should be able to understand this… if you don’t then go back and try again)

(f)                      "The rarer the recessive allele, the greater the degree of protection afforded by heterozygosity."

(g)                    That is, as recessive alleles become more and more rare, many, many more carriers of this allele will be heterozygotes (who are assymptomatic in the case of complete dominance, i.e., are hidden recessives) rather than homozygotes

(h)                    [hidden recessives, hidden recessive (Google Search)] [index]

(15) The Hardy-Weinberg theorem

(a)                    The above calculations are stated more formally as the Hardy-Weinberg theorem

(b)                    “The theorem states that the frequencies of alleles and genotypes in a population’s gene pool remain constant over the generations unless acted upon by agents other than Mendelian segregation and recombination of alleles.” (p. 447, Campbell & Reece, 2002)

(c)                    “The system operates somewhat like shuffling a deck of cards: No matter how many times the deck is reshuffled to deal out new hands, the deck itself remains the same. Aces do not grow more numerous than jacks. And the repeated shuffling of a population’s gene pool over the generations cannot, in itself, increase the frequency of one allele relative to another.” (p. 448, Campbell & Reece, 2002)

(d)                    In the Hardy-Weinberg theorem it is assumed that matings between individuals within a population occur randomly and that no evolution is occurring within the population

(e)                    Under such conditions genotype frequency may be calculated from allele frequency information as described above (i.e., p2 + 2pq + q2)

(f)                      The existence of this calculation given these assumptions is termed the Hardy-Weinberg theorem

(g)                    See Figure 23.3, The Hardy-Weinberg theorem

(h)                   

(i)                      “The Hardy-Weinberg theorem is important conceptually and historically because it shows how Mendel’s theory of inheritance plugs a hole in Darwin’s theory of natural selection… The Hardy-Weinberg theorem explains how Mendelian inheritance preserves genetic variation from one generation to the next.” (p. 449, Campbell & Reece, 2002)

(j)                      [Hardy-Weinberg theorem (Google Search)] [Hardy-Weinberg Equilibrium (a guide to teaching H-W at the pre-college level) (see also…) (Judith Stanhope)] [population genetics, Hardy-Weinberg equilibrium, and the modes of evolution (a lecture) (Rebecca Irwin)] [model construction and the Hardy-Weinberg equilibrium (model construction and hypothesis testing using Hardy-Weinberg as example) (Biomathematics -- Sally Otto)] [index]

(16) Hardy-Weinberg equilibrium

(a)                    Note that so long as no evolution is occurring within a population then allele frequencies are not changing within that population

(b)                    So long as allele frequencies are not changing, then genotype frequencies may be calculated using the Hardy-Weinberg theorem

(c)                    Furthermore, so long as these conditions stay the same, then genotype frequency will remain the same, as calculated above (this is true because genotype frequencies under these conditions are not a function of genotype frequencies so much as allele frequencies, and allele frequencies we are assuming are not changing)

(d)                    The constant genotype frequencies in the absence of evolution and given Hardy-Weinberg conditions is called Hardy-Weinberg equilibrium

(e)                    That this is an equilibrium is implied by the absence of change over time (particularly change in genotype frequency since a lack of change in allele frequencies is, in fact, one of our assumptions)

(f)                      Remember that, given the appropriate conditions (above), it takes only a single generation to generate a Hardy-Weinberg equilibrium

(g)                    ["The discrete genes Mendel discovered would exist at some frequency in natural populations. Biologists wondered how and if these frequencies would change. Many thought that the more common versions of genes would increase in frequency simply because they were already at high frequency. Hardy and Weinberg independently showed that the frequency of an allele would not change over time simply due to its being rare or common." (Talk.Origins)]

(h)                    [Hardy-Weinberg equilibrium, the Hardy-Weinberg equilibrium simulator, Hardy-Weinberg problems (Google Search)] [population genetics, Hardy-Weinberg equilibrium, and the modes of evolution (Biology 391: Organic Evolution)] [index]

(17) No evolution” (= absense of microevolution)

(a)                    Hardy-Weinberg equilibrium represents the no-evolution ground state for population genetics studies; it is what you "expect if a population is not evolving"; it is the null hypothesis

(b)                    "If the frequencies of alleles or genotypes deviate from values expected from Hardy-Weinberg equilibrium, then the population is evolving… If we track allele and genotype frequencies in a population over a succession of generations, some loci may be at equilibrium, while frequencies of alleles at other loci may be changing."

(c)                    More specifically, Hardy-Weinberg conditions assume an absence of microevolutionary forces

(d)                    To accomplish this, Hardy-Weinberg conditions include

(i)                      Very large (infinite) population sizes

(ii)                    Isolation from other populations

(iii)                   No net mutations

(iv)                  Random mating

(v)                    No natural selection

(e)                    These conditions correspond to the five mechanisms of microevolution

(i)                      Genetic drift

(ii)                    Gene flow between populations (migration)

(iii)                   Mutation

(iv)                  Nonrandom mating

(v)                    Natural selection

(f)                      “…we do not really expect a natural population to be in Hardy-Weinberg equilibrium. And a deviation from the stability of a gene pool—and from Hardy-Weinberg equlibrium—usually results in evolution.” (p. 449, Campbell & Reece, 2002)

(g)                    [microevolution, microevolutionary forces (Google Search)] [index]

 

NON-DARWINIAN EVOLUTION

 

(18) Non-Darwinian evolution (Darwinian evolution)

(a)                    "Of all the causes of microevolution, only natural selection generally adapts a population to its environment. The other agents of microevolution are sometimes called non-Darwinian because of their usually non-adaptive nature."

(b)                    These are genetic drift (i.e., sampling error), migration (i.e., gene flow), and mutation

(c)                    That is, only natural selection is always an agent of positive change (at least over the short term and in the sense of adapting a population to its local environment); all other mechanisms can be agents of positive change, but are not necessarily so

(d)                    Only natural selection represents Darwinian evolution, all other mechanism of microevolution may be termed non-Darwinian evolution

(e)                    [Darwinian evolution, non-Darwinian evolution (Google Search)] [index]

(19) Genetic Drift

(a)                    Genetic drift is sampling error

(b)                    Whenever a population size is less than infinite, then the Hardy-Weinberg equation will fail to predict genotype frequencies exactly

(c)                    This problem increases in magnitude as population sizes become smaller

(d)                    Sampling error affects the transfer of alleles from one generation to the next, resulting in a random increase or decrease in the frequency of a given allele

(e)                    This latter effect is known as genetic drift

(f)                      Note that the alleles lost are not necessarily the same alleles as may have been lost due to natural selection

(g)                    Again, this problem only increases with smaller population sizes

(h)                    See Figure 23.4, Genetic drift

(i)                      Two situations in which the effects of genetic drift are particularly dramatic include

(i)                      Bottleneck effect

(ii)                    Founder effect

(j)                      ["Sharp drops in population size can change allele frequencies substantially. When a population crashes, the alleles in the surviving sample may not be representative of the precrash gene pool. This change in the gene pool is called the founder effect, because small populations of organisms that invade a new territory (founders) are subject to this. Many biologists feel the genetic changes brought about by founder effects may contribute to isolated populations developing reproductive isolation from their parent populations. In sufficiently small populations, genetic drift can counteract selection. [genetic drift: a random change in allele frequencies] Mildly deleterious alleles may drift to fixation." (Talk.Origins)]

(k)                    [genetic drift (Google Search)] [genetic drift and gene flow (EEOB 208 -- Processes of Evolution)] [random genetic drift (The Talk.Origins)] [gentic drift and gene flow (Biology 391: Organic Evolution)] [index]

(20) Bottleneck effect (genetic bottleneck)

(a)                    When a population is reduced in size by some non-microevolutionary means (e.g., via a natural disaster), sampling error results in the allele frequencies of the new population not likely matching what were the allele frequencies in the old population

(b)                    See Figure 23.5, The bottleneck effect: an analogy

(a)                   

(b)                    Furthermore, the longer a population remains at a reduced size, the greater the effect of genetic drift on allele frequency

(c)                    Ultimately, the result of genetic bottlenecks is the loss of allelic variation (i.e., the fixing of alleles)

(d)                    Genetic bottlenecks can lead to the fixing of maladaptive alleles (i.e., genetic defects)

(e)                    ["bottleneck effect" and "genetic drift" (Google Search)] [index]

(21) Founder effect

(a)                    Genetic bottlenecks are characterized by declines in population size due to individual mortality

(b)                    An alternative means by which population size may be decreased is via the transplanting of part of a population to a new locale

(c)                    This new population is smaller than its parent population and therefore is subject to the effects of sampling error

(d)                    (Consequently, new populations tend to possess a different genetic structure than their parent populations)

(e)                    Consequently, new populations tend to possess different allele frequencies than their parent populations

(f)                      This effect is enhanced with smaller founder populations

(g)                    This effect is also enhanced by (but are not identical to) bottleneck effects that result from the new population remaining small over many generations

(h)                    The net effect is for new populations to not resemble parent populations in terms of allele frequencies (and genetic structure)

(i)                      Founder effects probably play relevant roles in speciation since they set it up so that two populations are genetically dissimilar essentially from the start

(j)                     

(k)                    ["founder effect" and "genetic drift", "founder's effect" and "genetic drift" (Google Search)] [index]

(22) Migration (gene flow)

(a)                    The degree to which two populations resemble each other depends on the degree of gene flow between those two populations

(b)                    Gene flow is essentially the movement of alleles into and out of populations

(c)                    Of course, these alleles are carried within individuals who are doing the actual moving (migration) between populations

(d)                    Depending on the degree of gene flow between populations, allele frequencies of populations will be dissimilar to different degrees: the more gene flow, the more similar, the less gene flow, the less similar

(e)                    Note that migration is a microevolutionary event since the movement of an allele into or out of a population automatically changes allele frequency (either increasing or decreasing allele frequency)

(f)                      [migration and evolution, gene flow (Google Search)] [index]

(23) Mutation

(a)                    Mutation (or, at least, net mutation) also automatically changes allele frequency

(b)                    For example, a mutation involves the conversion of one allele into another allele

(c)                    Typically mutation does not play a big, direct role in changing allele frequency because mutation rates per locus tend to be low

(d)                    However, indirectly mutation is absolutely essential to microevolutionary processes because all allelic variation ultimately has a mutational origin

(e)                    That is, mutations make the new alleles that then either increase or decrease in frequency via the other microevolutionary forces

(f)                      However, keep in mind that mutations are not only rare but also often represent random changes in highly evolved (i.e., information laden) nucleotide sequences

(g)                    As a consequence, mutation typically results in a loss in gene (product) function—that is, adaptations are lost (though this loss is limited to those organisms carrying the mutation)

(h)                    "Organisms are the refined products of thousands of generations of past selection, and a random change is not likely to improve the genome any more than firing a gunshot blindly through the hood of a car is likely to improve engine performance."

(i)                      Consequently, most mutations are recessive

(j)                      Every now and then, though, a mutational change is adaptive (and even less often, both adaptive and dominant or codominant), i.e., novel functions or novel expression of old functions

(k)                    "On rare occasions, however, a mutant allele may actually fit its bearer to the environment better and enhance the reproductive success of the individual. This is not especially likely in a stable environment, but becomes more probable when the environment is changing and mutations that were once selected against are now favorable under the new conditions."

(l)                      [mutation and evolution, mutation and microevolution (Google Search)] [are mutations harmful? (The Talk.Origins)] [index]

 

NATURAL SELECTION

 

(24) Natural selection

(a)                    “An organisms exposes its phenotype—its physical traits, metabolism, physiology, and behavior—not its genotype, to the environment. Acting on phenotypes, selection indirectly adapts a population to its environment by increasing or maintaining favorable genotypes in the gene pool.” (p. 458, Campbell & Reece, 2002)

(b)                    Natural selection can act during either the haploid or diploid stage

(c)                    If it acts during the diploid stage, then natural selection affects the contribution of genotypes to the gene pool

(d)                    That is, natural selection serves to reduce certain genotypes relative to others in terms of their contribution of alleles to the gene pool

(e)                    Natural selection acting at the haploid stage serves to reduce allelic frequency directly

(f)                      Note that in either case the effect of natural selection is to reduce (not to increase) the absolute number of genotypes or alleles

(g)                    That is, mutation places alleles into a gene pool, other microevolutionary forces can serve to increase the frequency of the allele, but selection acts to selectively remove maladaptive alleles (mutation in, selection out)

(h)                    Natural selection is differential reproductive success: in the absence of natural selection an organism contributes x gametes to the next generation; in the presence of natural selection an organism contributes <x gametes to the next generation

(i)                      "Of all agents of microevolution that change a gene pool, only selection is likely to be adaptive. Natural selection accumulates and maintains favorable genotypes in a population. If the environment should change, selection responds by favoring genotypes adapted to the new conditions. But the degree of adaptation can be extended only within the realm of the genetic variability present in the population."

(j)                      Natural selection serves to increase the information content contained within the genomes of the organisms of a population; more specifically, it increases the prevalence of information which has been time-tested to allow the increased survival and reproduction of genotypes within the environment in which a population resides

[natural selection (Google Search)] [a population genetics model of natural selection (a lecture) (Rebecca Irwin)] [index]

(25) Darwinian Fitness

(a)                    “Darwinian fitness is the contribution an individual makes to the gene pool of the next generation relative to the contributions of other individuals.” (p. 457, Campbell & Reece, 2002)

(b)                    Darwinian fitness is the allelic contribution an individual makes to the next generation

(c)                    Thus, the more likely an individual is to survive and reproduce (i.e., to contributes its alleles to the next generation), the higher that individual's Darwinian fitness

(d)                    Note that the Darwinian fitness is a quantity equal to the average reproductive output associated with a given genotype

(e)                    Thus, Darwinian fitness is an environment-specific quantity (i.e., it may change depending on environment)

(f)                      Darwinian fitness is often simply called fitness

(g)                    People typically consider Darwinian fitness on a locus-by-locus basis since things (e.g., experimentation as well as theorizing) get very complicated the more loci there are involved

(h)                    [Darwinian fitness (Google Search)] [index]

(26) Relative fitness

(a)                    “In a more quantitative approach to natural selection, population geneticists define relative fitness as the contribution of a genotype to the next generation compared to the contributions of alternative genotypes for the same locus… The relative fitness of the most reproductively successful variants is set at 1 as a basis for comparison.” (pp. 458-459, Campbell & Reece, 2002)

(b)                    For a given locus, the Darwinian fitness associated with different genotypes may be determined

(c)                    Typically these fitnesses are presented as relative quantities rather than as absolutes

(d)                    Typically the genotype with the highest Darwinian fitness is given a relative fitness value of 1.0

(e)                    All other genotypes, i.e., those with lower than the highest Darwinian fitness, then have relative fitness values of less than 1.0

(f)                      If one genotype produces on average 4 progeny per generation and another produces on average 1 progeny per generation, then what is the relative fitness of the latter genotype? The former? (answer: 0.25 and 1.0, respectively)

(g)                    Relative fitness and the “selection coefficients” employed when mathematically following the impact of selection on a population are essentially identical concepts

(h)                    Relative fitness especially comes into play when considering competition between conspecifics—do you understand why?

(i)                      “Survival alone does not guarantee reproductive success. Relative fitness is zero for a sterile plant or animal, even if it is robust and outlives other members of the population. But , of course, survival is a prerequisite for reproducing, and longevity increases fitness if it results in certain individuals leaving more descendants than other individuals leave.” (p. 458, Campbell & Reece, 2002)

(j)                      [relative fitness (Google Search)] [index]

(27) Action of natural selection

(a)                    "Survival alone does not guarantee reproductive success. Relative fitness is zero for a sterile plant or animal even if it is robust and outlives other members of the population. But, of course, survival is a prerequisite for reproducing, and longevity increases fitness if it results in certain individuals leaving disproportionately high numbers of descendants. Then again, an individual that matures quickly and becomes fertile at an early age may have a greater reproductive potential than individuals that live longer but mature late. Thus, the components of selection are the many factors that affect both survival and fertility."

(b)                    In following a population through generations, one that is undergoing natural selection but is otherwise adhering to Hardy-Weinberg conditions, A population will go through the following contortions (note typical animal sexual cycle):

(i)                      Diploid 4 Meiosis 4 Haploid 4 Fertilization 4 Diploid 4 Mitosis

(ii)                    Natural selection can reduce the frequency of certain genotypes relative to others; note that this happens formally by multiplying genotype frequency by relative fitness and then recalculating genotype frequencies (do you know how to do this/understand what I mean?)

(iii)                   Natural selection can also act at the level of gamete generation; obviously an individual who can't make gametes has a Darwinian fitness (and relative fitness) of zero

(iv)                  An individual fails to fertilize if an individual fails to mate (or if an individual dies before reaching sexual maturity…)

(c)                    "A genotype at a particular locus may have multiple effects, especially if it influences the development or growth of the organism. This ability of genes to influence many phenotypic characters is called pleiotropy. The overall fitness of a genotype depends on whether its positive effects outweigh any harmful effects it may have on the survival and reproductive success of the organism… The finished organism subjected to natural selection is an integrated composite of its many phenotypic features, not a collage of individual parts. The relative fitness of a genotype at any one locus depends on the entire genetic context in which it works." —in other words, things get very complicate, very fast, and organisms are always at best compromises between competing selective forces

(d)                    [action of natural selection (Google Search)] [index]

 

MANY MODES/TYPES OF NATURAL SELECTION

 

(28) Modes of natural selection

(a)                    Natural selection edits out mutational variation

(b)                    However, natural selection is considered to display different modes depending on what is being edited out

(c)                    Consider a character that is controlled by many loci and whose associated traits span a spectrum such as from short to tall (for the character height) or light to dark (for the character hair color), etc.

(d)                    In such a case, depending on where on a given spectrum natural selection acts most strongly, selection may be classified as

(i)                      Stabilizing selection

(ii)                    Directional selection

(iii)                   Diversifying selection

(e)                    See Figure 23.12, Modes of selection

(f)                     

(g)                    [modes of natural selection (Google Search)] [index]

(29) Stabilizing selection

(a)                    Stabilizing selection eliminates phenotypic extremes within a population thus increasing the frequency of genotypes underlying intermediate phenotypes

(b)                    Thus, stabilized populations tend to be reasonably well adapted to their environments

(c)                    (what does that statement mean? It means that we can infer, minimally, that the extreme phenotypes are less well adapted to the environment than the intermediate phenotypes. Why? Because natural selection is selectively removing the extreme phenotypes rather than the now by-definition better-adapted intermediate phenotypes. If those intermediate phenotypes were not reasonably well adapted to their environment, then the population would be in fairly rapid decline and therefore, in all likelihood, either not be observed or be only briefly observed)

(d)                    [stabilizing selection (Google Search)] [index]

(30) Directional selection

(a)                    Directional selection is natural selection against only one phenotypic extreme

Directional Selection (in Macroevolution)

The fossil lineage of the horse provides a remarkable demonstration of directional succession. The full lineage is quite complicated and is not just a simple line from the tiny dawn horse Hyracotherium of the early Eocene, to today's familiar Equus. Overall, though, the horse has evolved from a small-bodied ancestor built for moving through woodlands and thickets to its long- legged descendent built for speed on the open grassland. This evolution has involved well- documented changes in teeth, leg length, and toe structure.

(b)                    The net effect of directional selection is to increase or decrease the character along the spectrum of its possible expression (i.e., taller, shorter, etc.)

(c)                    [directional selection (Google Search)] [index]

(31) Diversifying selection (a.k.a., disruptive selection)

(a)                    In diversifying selection it is the intermediate form that is selected against

(b)                    Diversifying selection can result in balanced polymorphisms

(c)                    [diversifying selection, disruptive selection (Google Search)] [index]

(32) Sexual selection (sexual dimorphism, secondary sexual characteristics)

(a)                    Males and females often differ phenotypically other than in their possessing different sexual organs

(b)                    Such differences are referred to as sexual dimorphisms or secondary sexual characteristics

(c)                    For example, human males generally are taller, heavier, and hairier than human females

(d)                    Sexual dimorphisms often are involved in mate procurement

(e)                    We can distinguish sexual selection into an intrasexual and intersexual selection

(f)                      [sexual selection, sexual dimorphism (Google Search)] [index]

(33) Intrasexual selection

(a)                    “Intrasexual selection is a direct competition among individuals of one sex (usually the males in vertebrates) for mates of the opposite sex. Males may use secondary sexual equipment such as antlers to battle competitors. This is especially common in species where a single male garners a harem of females. These males may gain their status by defeating smaller, weaker, or less fierce males in combat; more often, they are the victors in ritualized displays that discourage would-be competitors.” (p. 460, Campbell & Reece, 2002)

(b)                    The better fighter typically is the fighter that gains preferred access to the female and, of course, genes can underlie fighting ability

(c)                    [intrasexual selection (Google Search)] [index]

(34) Intersexual selection (mate choice)

(a)                    Any trait that increases the attractiveness of an individual to sexually mature members of the opposite gender will confer a selective advantage to the bearer because this attractiveness will increase the bearer's likelihood of either

(i)                      depositing its gametes in the gene pool or

(ii)                    having its gametes fertilize the gametes of an individual possessing a preferred genotype

(b)                    This can all get very complicated since just what a preferred genotype is can depend on just what a preferred genotype is (i.e., positive feedback)

(c)                    Regardless, the alleles that lead to an increase an individual’s ability to either secure a mate or to secure the mate of one's choice are selected, at least in part, by a form of natural selection known as sexual selection

(d)                    “In intersexual selection, also called mate choice, individuals of one sex (usually females) are choosy in selecting their mates from individuals of the other sex. Apparently, males with the most impressive masculine features are the most attractive to females. A peacock strutting in front of hens with his tail feathers spread into a showy fan is an example of this ‘choose me’ statement. What intrigued Darwin about such behavior is that some of the features that appear to help attract mates do not seem to be adaptive in any other way and may in fact pose some risk in natural environments [i.e., negatively impact on survival]. For example, showy plumage may make male birds more visible to predators. But if such secondary sexual characteristics help a male gain a mate, then they will be reinforced over the generations for he most Darwinian of reasons—because they enhance reproductive success. Every time a female chooses a mate based on a certain appearance or behavior, she perpetuates the alleles that caused her to make that choice and allows a male with a particular phenotype to perpetuate his alleles.” (p. 461, Campbell & Reece, 2002)

(a)                    [intersexual selection (Google Search)] [index]

 

NATURAL SELECTION’S RAW MATERIAL

 

(35) Polymorphism

(a)                    "Heritable variation is at the heart of Darwin's theory of evolution, for variation provides the raw material—the substrate—on which natural selection works."

(b)                    A polymorphism describes the situation where more than one allele is present within a gene pool at a given locus

(c)                    Note that in practice polymorphism tends to mean that one allele does not overwhelmingly dominates a given locus (such that all other alleles are very rare)

(d)                    Finally, the term polymorphism is derived from the idea that a population consists of individuals having two or more distinct morphologies; this concept has since been extended to the broader idea of more than one phenotype (or even more than one genotype); at the level of molecules, phenotypes vary dependent on variations in alleles; consequently, a locus that possesses more than a single allele across a single gene pool is said to be polymorphic, regardless of the effects of the individual alleles on morphology

(e)                    In general, there is a lot more polymorphism in wild populations than one might otherwise expect

(f)                      Heritable variation within a population is synonymous with polymorphism (if only a single allele exists at a given locus, then by definition there is no heritable variation at that locus)

(i)                      Therefore, the raw material of natural selection are polymorphisms

(ii)                    Therefore, the fewer polymorphisms, the less ably a population can respond to environmental change (i.e., the population is less able to adapt)

(iii)                   Therefore, the less polymorphism, the more likely a population will go extinct given environmental change

(iv)                  The effect of reduced population size is genetic drift which tends to reduce genetic variability (i.e., reduce the number of polymorphisms)

(v)                    Lack of adaptation to environmental change further reduces population size which further reduces polymorphism

(vi)                  The effect of man on the environment generally is to reduce population sizes while simultaneously effecting environmental change (guess what comes next)

(g)                    Note that “Polymorphism applies only to discrete characters, not to characters such as human height, which varies among people in a continuum.” (p. 453, Campbell & Reece, 2003)

(h)                    [polymorphism and allele (Google Search)] [index]

(36) Hiding deleterious recessives

(a)                    “The diploid nature of most eukaryotes hides a considerable amount of genetic variation from selection in the form of recessive alleles in heterozygotes. Recessive alleles that are less favorable than their dominant counterparts, or even harmful in the present environment, can persist in a population through their propagation by heterozygous individuals. This latent variation is exposed to selection only when both parents carry the same recessive allele and combine two copies in one zygote. This happens only rarely if the frequency of the recessive allele is very low. The rarer the recessive allele, the greater the degree of protection from natural selection [using the Hardy-Weinberg theorem concepts, do you understand why?]. Heterozygote protection maintains a huge pool of alleles that may not be suitable for present conditions but that could bring new benefits when the environment changes.” (p. 456, Campbell & Reece, 2002)

(b)                    Note that this hiding of alleles from natural selection is not the same as a balanced polymorphism; based on your understanding of balanced polymorphism (defined below) do you understand why?

(37) Balanced polymorphisms

(a)                    Polymorphisms tend to be eliminated by either natural selection (should one of the alleles be selectively disadvantageous) or by genetic drift (especially if population sizes are small)

(b)                    Recessive alleles are more difficult to eliminate than are dominant alleles because the former tend to be tied up in phenotypically dominant heterozygotes

(c)                    A number of additional mechanisms tend to preserve polymorphisms

(i)                      Heterozygous advantage

(ii)                    Hybrid vigor

(iii)                   Frequency-dependent selection

(iv)                  Neutral variation

(d)                    A stably persisting polymorphism is known as a balanced polymorphism

(e)                    The existence of a balanced polymorphism implies a lack of allele fixation and, furthermore, the existence of a mechanism or mechanisms that inhibits the fixation of a given allele

(f)                      [balanced polymorphism (Google Search)] [index]

 

MECHANISMS FOR MAINTAINING POLYMORPHISMS

 

(38) Heterozygous advantage (balancing selection)

(a)                    In certain circumstances the heterozygote is better adapted than either homozygote

(b)                    In such circumstances, the greater adaptedness of the heterozygote prevents the extinction of one or the other allele

(c)                    An example is sickle-cell disease where the heterozygote is more resistant to malaria than either homozygote while the affected homozygote dies young from sickle-cell disease, but the allele is nevertheless maintained in areas experiencing high incidences of malaria

(d)                    ["Balancing selection is rare in natural populations. [balancing selection: selection favoring heterozygotes] Only a handful of other cases beside the sickle-cell example have been found. At one time population geneticists thought balancing selection could be a general explanation for the levels of genetic variation found in natural populations. That is no longer the case. Balancing selection is only rarely found in natural populations. And, there are theoretical reasons why natural selection cannot maintain polymorphisms at several loci via balancing selection." (Talk.Origins)]

(e)                    [heterozygous advantage (Google Search)] [index]

(39) Hybrid vigor

(a)                    Hybrid vigor is related to heterozygous advantage

(b)                    The idea here is that when two inbred individuals are mated, the hybrid offspring typically displays greater vigor (is better adapted) than either parent

(c)                    This occurs in part due to heterozygous advantage and also due to a simple masking of deleterious recessives (do you understand the difference? Essentially heterozygous advantage is a product of a codominant relationship between alleles while the masking of deleterious recessives is a product instead of a dominant-recessive relationship)

(d)                    Hybrid vigor is best exemplified in the production of hybrid horticultural varieties, e.g., hybrid corn

(e)                    Note that the concept of hybrid vigor makes the most sense particularly when considering the formation of a heterozygote across more than one locus

(f)                      [hybrid vigor (Google Search)] [index]

(40) Frequency-dependent selection

(a)                    Frequency-dependent selection occurs in situations where the advantage of possessing an allele increases with a decreasing frequency of that allele (i.e., increasing rarity); that is, there is more survival and increases in reproductive success as a genotype gets rarer, thereby interfering with the elimination of the underlying alleles from the population

(b)                    Rarity tends to be a factor when an allele is involved in combating an enemy

(c)                    For example, frequency-dependent selection is found among butterflies who mimic other, foul-tasting butterflies—the more prevalent the mimic, the less likely the predator (a bird) will worry about accidentally consuming a foul-tasting species; this places a natural cap on the mimic's population size, thus resulting in an advantage associated with mimicking a different-looking foul-tasting species (i.e., employing a different, rarer morphology)

(d)                    Major histocompatibility proteins (the killer T-cell receptor) also are the product of frequency-dependent selection; different alleles result in different abilities to recognize different pathogens (particularly viruses); individuals with common alleles are susceptible to viruses which have evolved to evade alleles common to the rest of the population

(e)                    Parasites, similarly, may be subject to frequency dependent selection as hosts develop resistance to more common parasite phenotypes

(f)                     See Figure 23.11, Frequency-dependent selection in a host-parasite relationship

(a)                    [frequency-dependent selection (Google Search)] [index]

(41) Neutral variation

(a)                    Neutral mutations minimally disrupt the adaptedness of an organism, e.g., impacts extremely minimally on phenotype, in such a way that natural selection cannot distinguish alleles

(b)                    Such neutral mutations tend, by definition, not to be eliminated from populations by natural selection

(c)                    Thus, in populations that are large enough to display minimal genetic drift, neutral variation can be very abundant

(d)                    Note that neutral variation by definition need be neutral only within the context of the environment in which an organism resides

(e)                    Transfer to a new environment may increase or decrease the selective advantage associated with an allele; thus, neutral alleles serve as a reservoir of allelic variation

(f)                      “There is no consensus among evolutionary biologists on how much genetic variation is neutral or even if any variation can be considered truly neutral. Variations that appear to be neutral may in fact influence survival and reproductive success in ways that are difficulty to measure. It is possible to show that a particular allele is detrimental, but it is impossible to demonstrate that an allele brings no benefits at all to an organism. Furthermore, a variation may be neutral in one environment but not in another. We can never know the degree that even if only a fraction of the extensive variation in a gene pool significantly affects the organisms, that is still an enormous reservoir of raw material for natural selection and the adaptive evolution it causes.” (p. 457, Campbell & Reece, 2002)

(g)                    [neutral variation (Google Search)] [index]

 

NATURAL SELECTION’S LIMITATIONS

 

(42) Does evolution fashion perfect organisms?

(a)                    No! Why not?

(b)                    "An organism's phenotype is constrained by its evolutionary history"

(i)                      Some snakes may be able to glide, but it's unlikely one will ever flap a wing

(c)                    "Adaptations are often compromises"

(i)                      Any engineer knows the truth that optimizing one aspect of a design inevitably compromises another

(ii)                    That is why you might be able to take out all of your friends in your mom's minivan, but you'll never beat a motorcycle in a drag race with it

(d)                    "Not all evolution is adaptive"

(i)                      It takes too much energy to optimize everything so much of most organisms is simply good enough to get the job done (a.k.a., the principle of allocation)

(ii)                    If it ain't broke, don't fix it

(e)                    "Selection can only edit variations that exist"

(i)                      In part this is continuation of the first point

(ii)                    Also, it is an indication that it is tough to get all of the right components of an adaptation into a single individual, then keep them there in descendents

(iii)                   Finally, even if an optimal allele can in theory be reached mutationally, expect within large populations the needed mutation likely will not be achieved

(f)                      Environments change

(i)                      Even if a perfect organism existed, it would only remain perfect so long as its environment remained unchanged (i.e., the one to which it is perfectly adapted)

(ii)                    Environments change all the time, not necessarily catastrophically, but change nonetheless

(g)                    Environments vary over even individual life spans

(i)                      To make matters worse, environments even change over single individual's life spans

(ii)                    Thus, the environment to which the hypothetical perfectly adapted organism is adapted tends to always be a moving target

(h)                    [perfect organisms (Google Search)] [index]

(43) Summary

(a)                    "Natural selection is usually thought of as an agent of change, but it can also act to maintain the status quo. Stabilizing selection probably prevails most of the time, resisting change that may be maladaptive. Evolutionary spurts occur when a population is stressed by a change in the environment, to a new place, or a change in the genome. When challenged with a new set of problems, a population either adjusts through natural selection or becomes extinct. The fossil record indicates that extinction is the more common outcome."

 

NONRANDOM MATING (AND CONSEQUENCES)

 

(44) Nonrandom mating (random mating)

(a)                    The gene pool within a population in Hardy-Weinberg equilibrium completely lacks structure (i.e., there is complete mixing)

(b)                    I typically like to think of the pool very literally as a well mixed tub of randomly colliding sperm and eggs

(c)                    Anything that interferes with this nonrandom fertilization constitutes structure within the gene pool

(d)                    Since many organisms make babies employing a more controlled, less promiscuous mixing of gametes, structure within a gene pool is typically manifest as nonrandom mating

(e)                    Anything that interferes with the random mating between individuals (now think of a well mixed bowl of males and females randomly . . . oh, never mind) is nonrandom mating

(f)                      Nonrandom mating results in deviations from a Hardy-Weinberg generation of genotypes from a given frequency of alleles

(g)                    Two aspects of nonrandom mating are

(i)                      Inbreeding

(ii)                    Assortative mating

(h)                    [nonrandom mating (Google Search)] [index]

(45) Inbreeding (supplemental discussion)

(a)                    Inbreeding typically results from individuals nonrandomly mating over geographical distances

(b)                    Basically, in a population which is not well mixed (i.e., not highly mobile) individuals more likely mate with neighbors than with non-neighbors (the guy next door versus the guy 8,000 miles down the road)

(c)                    This nonrandom mating and minimal movement means that, with time, individuals are more likely to mate with relatives than with non-relatives (more precisely: with closer relatives than with more distant relatives)

(d)                    Inbreeding requires effectively small population sizes (i.e., mating within an artificially constrained gene pools) so is a mechanism associated with genetic drift (e.g., inbreeding results from bottleneck and founder effects) though is not a mechanism of genetic drift (associated here meaning found occurring under the same circumstances)

(e)                    Thus, inbreeding tends to be associated with the expression of rare recessive alleles (in a homozygous state) and even a local fixing of alleles of alleles that are otherwise rare in larger populations

(f)                      [inbreeding, inbreeding and evolution (Google Search)] [index]

(46) Assortative mating (supplemental discussion)

(a)                    Assortative mating is where an individual chooses a mate based on how that mate resembles the individual

(b)                    For example (and I'm not exactly sure how I pulled this off), I married a girl who looks like my mother

(c)                    Note that assortative mating serves to constrain the breadth of one's gene pool potentially resulting in inbreeding and all of the consequences of inbreeding discussed above

(d)                    That is, one major consequence of inbreeding is a decline in heterozyogosity

(e)                    Note, however, that in an infinite population with no selection, no migration, and no mutation, assortative mating will not have an impact on allele frequency because decreasing heterozygosity only results in changes in allele frequency given the existence of natural selection

(f)                      Assortative mating will certainly impact on genotype frequency, however (Why? If you understand assortative mating, genotype frequency, and the impact of the various Hardy-Weinberg assumptions, then the answer should be obvious)

(g)                    [assortative mating (Google Search)] [index]

 

STRATEGIES FOR SOLVING HARDY-WEINBERG PROBLEMS

 

(47) Strategies for solving Hardy-Weinberg problems

(a)                    General strategies to employ when attempting Hardy-Weinberg problems

(i)                      Think of these problems as puzzles and then keep telling yourself that it's only a puzzle or a game; that is, just go with the flow; stressing yourself out at any juncture in life is counterproductive

(ii)                    For introductory problems one can usually assume one locus, two allele, diploid genetics; if this is not the case, often one will be told so with the exception of questions that ask for speculation as to the number of loci, alleles, or the ploidy involved

(iii)                   Always assume Hardy-Weinberg equilibrium unless information contradicts that assumption; you can always reject this hypothesis down the road

(b)                    Work with decimals

(i)                      Decimals typically are easier to work with than percentages, fractions, or absolute numbers. Consequently:

·        Always convert percentage information into decimal information (i.e., frequencies; 97% à 0.97)

·        Always convert fractions into decimals

·        Always convert absolute information (e.g., numbers of individuals) into decimal information (e.g., frequencies of phenotypes)

(c)                    Convert phenotypes to genotypes

(i)                      Always look for how you might convert phenotype information into genotype information, and then do so; remember, solving Hardy-Weinberg problems is a game; whenever you see phenotype frequencies, you should start looking forward to deducing genotype frequencies

(ii)                    Remember, frequencies must add up to one

(iii)                   When phenotypes map onto genotypes one-to-one (e.g., codominance), then genotype frequencies are equal to phenotype frequencies

(iv)                  When phenotypes do not map onto genotypes one-to-one, then try to figure out the phenotype frequency of one homozygote, and then assume Hardy-Weinberg equilibrium (unless you have reason not to)

(v)                    Remember, again, frequencies must add up to one

(d)                    Convert genotypes to alleles

(i)                      When you have genotype frequencies, use that information to calculate allelic frequency; remember again that solving Hardy-Weinberg problems is only a game; whenever you see phenotype frequencies, you should start looking forward to deducing genotype frequencies

(ii)                    If you have Hardy-Weinberg equilibrium and have the frequency of one homozygote, then you can calculate at least one allele's frequency as the square root of the homozygote's frequency.

(iii)                   If you don't know allelic frequencies but do know genotype frequencies then you can calculate allelic frequencies by multiplying the frequency of each genotype by a coefficient equal to the number of alleles of one type in each genotype, then divide the quantity by 2 (e.g., f(A) = (f(AA)*2 + f(Aa)*1 + f(aa)*0)/2)

(iv)                  If you have not yet calculated genotype frequencies, but do know the absolute number of each genotype, then it is possible to skip a step and calculate allelic frequencies directly from absolute genotype numbers; just multiplying absolute numbers by the coefficient, as above, and then divide by twice the sum of the population size (i.e., the sum of the absolute numbers of genotypes)

(v)                    Remember, frequencies must add up to one

(e)                    Convert alleles to genotypes

(i)                      When you have allele frequencies, you can then calculate genotype frequencies using the Hardy-Weinberg equation, i.e., f(AA) = p2, f(Aa) = 2pq, and f(aa) = q2

(ii)                    Remember, frequencies must add up to one

(iii)                   Remember that you can generate genotype frequencies using the Hardy-Weinberg equation only if Hardy-Weinberg conditions apply.

(f)                     Incorporating selection

(i)                      Incorporating selection into Hardy-Weinberg problems complicates things somewhat

(ii)                    Selection is doable, however, so long as you keep in mind that the effect of selection is to reduce absolute genotype/phenotype/allele numbers

(iii)                   Operationally this may be accomplished by multiplying frequencies (typically genotype frequencies) by a selection coefficient

(iv)                  Remember that by following such a procedure the resulting "frequencies" will no longer add to one, but must be re-calculated such that genotype frequencies following selection are presented as decimals which do add up to one

(g)                    Practice

(i)                      As in much of life, the key to success is practice and dedication

(ii)                    Anything that you can do to make a difficult task an enjoyable one will always serve to make that task (and your life) easier; so lighten up and learn to enjoy doing population genetics

(iii)                   Remember, it's only a game

(h)                    [Hardy-Weinberg calculation (Karen Bjorndal)] [population genetics and evolution (exercises on solving Hardy-Weinberg problems) (Advanced Placement Labs)] [population genetics (exercises on solving Hardy-Weinberg problems) (Autotutorial Genetics)] [index]

 

VOCABULARY

 

(48) Vocabulary [index]

(a)                    Action of natural selection

(b)                    Allele frequency

(c)                    Assortative mating

(d)                    Balanced polymorphisms

(e)                    Bottleneck effect

(f)                      Calculating allele frequencies

(g)                    Calculating allele frequencies from genotype frequencies

(h)                    Calculating genotype frequencies from allele frequencies

(i)                      Darwinian evolution

(j)                      Darwinian Fitness

(k)                    Directional selection

(l)                      Disruptive selection

(m)                  Diversifying selection

(n)                    Does evolution fashion perfect organisms

(o)                    Fixed alelle

(p)                    Fixed locus

(q)                    Founder effect

(r)                     Frequency-dependent selection

(s)                     Gene frequency

(t)                      Gene flow

(u)                    Gene pool

(v)                    Genetic bottleneck

(w)                  Genetic drift

(x)                    Genetic structure

(y)                    Genotype frequency

(z)                     Hardy-Weinberg equilibrium

(aa)                 The Hardy-Weinberg theorem

(bb)                Heterozygous advantage

(cc)                 Hidden recessives

(dd)                Hiding deleterious recessives

(ee)                 Hybrid vigor

(ff)                    Inbreeding

(gg)                 Intersexual selection

(hh)                 Intrasexual selsection

(ii)                     Mate choice

(jj)                    Microevolution

(kk)                Migration

(ll)                     Modern synthesis

(mm)             Modes of natural selection

(nn)                 Mutation

(oo)                Natural selection

(pp)                Neutral variation

(qq)                No evolution

(rr)                   Non-Darwinian evolution

(ss)                  Nonrandom mating

(tt)                    Polymorphism

(uu)                 Population

(vv)                 Population genetics

(ww)             Relative fitness

(xx)                 Secondary sexual characteristics

(yy)                 Sexual dimorphism

(zz)                  Sexual selection

(aaa)             Species

(bbb)            Stabilizing selection

(ccc)             Summary